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Authors: Yoon Jeong Jang, Taehoon Kim, Makou Lin, Jeongim Kim, Kevin Begcy, Zhongchi Liu and Seonghee Lee.
bioRxiv (2024)
Abstract: "The plant hormone auxin plays a crucial role in regulating important functions in strawberry fruit development. Although a few studies have described the complex auxin biosynthetic and signaling pathway in wild diploid strawberry (Fragaria vesca), the molecular mechanisms underlying auxin biosynthesis and crosstalk in octoploid strawberry fruit development are not fully characterized. To address this knowledge gap, comprehensive transcriptomic analyses were conducted at different stages of fruit development and compared between the achene and receptacle to identify developmentally regulated auxin biosynthetic genes and transcription factors during the fruit ripening process. Similar to wild diploid strawberry, octoploid strawberry accumulates high levels of auxin in achene compared to receptacle. Consistently, genes functioning in auxin biosynthesis and conjugation, such as TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS (TAAs), YUCCA (YUCs), and GRETCHEN HAGEN 3 (GH3s) were found to be primarily expressed in the achene, with low expression in the receptacle. Interestingly, several genes involved in auxin transport and signaling like PIN-FORMED (PINs), AUXIN/INDOLE-3-ACETIC ACID proteins (Aux/IAAs), TRANSPORT INHIBITOR RESPONSE 1 / AUXIN-SIGNALING F-BOX (TIR/AFBs) and AUXIN RESPONSE FACTOR (ARFs) were more abundantly expressed in the receptacle. Moreover, by examining DEGs and their transcriptional profiles across all six developmental stages, we identified key auxin-related genes co-clustered with transcription factors from the NAM-ATAF1,2-CUC2/ WRKYGQK motif (NAC/WYKY), BASIC REGION/ LEUCINE ZIPPER motif (bZIP), and APETALA2/Ethylene Responsive Factor (AP2/ERF) groups. These results elucidate the complex regulatory network of auxin biosynthesis and its intricate crosstalk within the achene and receptacle, enriching our understanding of fruit development in octoploid strawberries."
Authors: Simon Moore, George Jervis, Jennifer F. Topping, Chunli Chen, Junli Liu and Keith Lindsey.
Plant Communications (2024)
Abstract: "The interaction between auxin and cytokinin is important in many aspects of plant development. Experimental measurements of both auxin and cytokinin concentration and reporter gene expression clearly show the coexistence of auxin and cytokinin concentration patterning in Arabidopsis root development. However, in the context of crosstalk between auxin, cytokinin and ethylene, little is known about how auxin and cytokinin concentration patterns simultaneously emerge and how they regulate each other in the Arabidopsis root. This work utilizes a wide range of experimental observations to propose a mechanism for simultaneous patterning of auxin and cytokinin concentration. In addition to the regulatory relationships between auxin and cytokinin, the mechanism reveals that ethylene signalling is an important factor in achieving simultaneous auxin and cytokinin patterning, while also predicting other experimental observations. Combining the mechanism with a realistic in silico root model reproduces experimental observations of both auxin and cytokinin patterning. Predictions made by the mechanism can be compared with a variety of experimental observations, including those conducted by our group and other independent experiments reported by other groups. Examples of these predictions include patterning of auxin biosynthesis rate, PIN1 and PIN2 pattern changes in pin3, 4, 7 mutants, cytokinin patterning change in the pls mutant, PLS patterning, as well as various trends in different mutants. This research unravels a plausible mechanism for simultaneous patterning of auxin and cytokinin concentrations in Arabidopsis root development and suggests a key role for ethylene pattern integration."
Authors: Cynthia Wong, David Alabadí and Miguel A. Blázquez.
Journal of Experimental Botany (2023)
Abstract: "Although many plant cell types are capable of producing hormones and plant hormones can in most cases act in the same cells in which they are produced, they also act as signaling molecules that coordinate physiological responses between different parts of the plant, indicating that their action is subject to spatial regulation. Numerous publications have reported that all levels of plant hormonal pathways, i.e., metabolism, transport, and perception/signal transduction, can help determine the spatial ranges of hormone action. For example, polar auxin transport or localized auxin biosynthesis contribute to creating a differential hormone accumulation across tissues that is instrumental for specific growth and developmental responses. On the other hand, tissue specificity of cytokinin actions has been proposed to be regulated by mechanisms operating at the signaling stages. Here, we review and discuss current knowledge about the contribution of the three levels mentioned above in providing spatial specificity to plant hormone action. We also explore how new technological developments, such as plant hormone sensors based on FRET or single-cell RNA-seq, can provide an unprecedented level of resolution in defining the spatial domains of plant hormone action and its dynamics."
Authors: Tomás M. Tessi, Veronica G. Maurino, Mojgan Shahriari, Esther Meissner, Ondrej Novak, Taras Pasternak, Benjamin S. Schumacher, Franck Ditengou, Zenglin Li, Jasmin Duerr, Noemi S. Flubacher, Moritz Nautscher, Alyssa Williams, Zuzanna Kazimierczak, Miroslav Strnad, Jörg-Oliver Thumfart, Klaus Palme, Marcelo Desimone and William D. Teale.
New Phytologist (2022)
Abstract: "An environmentally responsive root system is crucial for plant growth and crop yield, especially in sub-optimal soil conditions. This responsiveness enables the plant to exploit regions of high nutrient density whilst simultaneously minimizing abiotic stress. Despite the vital importance of root systems in regulating plant growth, significant gaps of knowledge exist in the mechanisms that regulate their architecture. Auxin defines both the frequency of lateral root (LR) initiation and the rate of LR outgrowth. Here we describe a search for proteins that regulate root system architecture by interacting directly with a key auxin transporter, PIN1. The native separation of Arabidopsis plasma membrane protein complexes identified several PIN1 co-purifying proteins. Among them, AZG1 was subsequently confirmed as a PIN1 interactor. Here we show that, in Arabidopsis, AZG1 is a cytokinin import protein that co-localizes with and stabilizes PIN1, linking auxin and cytokinin transport streams. AZG1 expression in LR primordia is sensitive to NaCl, and the frequency of LRs is AZG1-dependent under salt stress. This report therefore identifies a potential point for auxin:cytokinin crosstalk which shapes root system architecture in response to NaCl."
Authors: Batist Geldhof, Jolien Pattyn, Petar Mohorović, Karlien Van den Broeck, Vicky Everaerts, Ondřej Novák and Bram Van de Poel.
bioRxiv (2022)
Abstract: "Developing leaves undergo a vast array of age-related changes as they mature. These include physiological, hormonal and morphological changes that determine their adaptation plasticity towards adverse conditions. Waterlogging induces leaf epinasty in tomato, and the magnitude of leaf bending is intricately related to the age-dependent cellular and hormonal response. We now show that ethylene, the master regulator of epinasty, is differentially regulated throughout leaf development, giving rise to age-dependent epinastic responses. Young leaves have a higher basal ethylene production, but are less responsive to waterlogging-induced epinasty, as they have a higher capacity to convert the root-borne and mobilized ACC into the inactive conjugate MACC. Ethylene stimulates cell elongation relatively more at the adaxial petiole side, by activating auxin biosynthesis and locally inhibiting its transport through PIN4 and PIN9 in older and mature leaves. As a result, auxins accumulate in the petiole base of these leaves and enforce partially irreversible epinastic bending upon waterlogging. Young leaves maintain their potential to transport auxins, both locally and through the vascular tissue, leading to enhanced flexibility to dampen the epinastic response and a faster upwards repositioning during reoxygenation. This mechanism also explains the observed reduction of epinasty during and its recovery after waterlogging in the anthocyanin reduced (are) and Never ripe (Nr) mutants, both characterized by higher auxin flow. Our work has demonstrated that waterlogging activates intricate hormonal crosstalk between ethylene and auxin, controlled in an age-dependent way."
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Authors: Zoe Nahas, Fabrizio Ticchiarelli, Martin van Rongen, Jean Dillon and Ottoline Leyser.
New Phytologist (2024)
Abstract: "Arabidopsis thaliana (Arabidopsis) shoot architecture is largely determined by the pattern of axillary buds that grow into lateral branches, the regulation of which requires integrating both local and systemic signals. Nodal explants – stem explants each bearing one leaf and its associated axillary bud – are a simplified system to understand the regulation of bud activation. To explore signal integration in bud activation, we characterised the growth dynamics of buds in nodal explants in key mutants and under different treatments. We observed that isolated axillary buds activate in two genetically and physiologically separable phases: a slow-growing lag phase, followed by a switch to rapid outgrowth. Modifying BRANCHED1 expression or the properties of the auxin transport network, including via strigolactone application, changed the length of the lag phase. While most interventions affected only the length of the lag phase, strigolactone treatment and a second bud also affected the rapid growth phase. Our results are consistent with the hypothesis that the slow-growing lag phase corresponds to the time during which buds establish canalised auxin transport out of the bud, after which they enter a rapid growth phase. Our work also hints at a role for auxin transport in influencing the maximum growth rate of branches."
Authors: Craig L. Cowling, Linkan Dash and Dior R. Kelley.
Journal of Experimental Botany (2023)
Abstract: "Phytohormones play a central role in plant development and environmental responses. Auxin is a classical hormone that is required for organ formation, tissue patterning, and defense responses. Auxin pathways have been extensively studied across numerous land plant lineages, including bryophytes and eudicots. In contrast, our understanding of the roles of auxin in maize morphogenesis and immune responses are limited. Here, we will review evidence for auxin-mediated processes in maize and describe promising areas for future research in the auxin field. Several recent transcriptomic and genetic studies have demonstrated that auxin is a key influencer of both vegetative and reproductive development in maize (namely roots, leaves and kernels). Auxin signaling has been implicated in both maize shoot architecture and immune responses through genetic and molecular analyses of the conserved co-repressor RAMOSA ENHANCER LOCUS2. Polar auxin transport is linked to maize drought responses, root growth, shoot formation, and leaf morphogenesis. Notably, maize has been a key system for delineating auxin biosynthetic pathways and offers many opportunities for future investigations on auxin metabolism. In addition, crosstalk between auxin and other phytohormones has been uncovered through gene expression studies and are important for leaf and root development in maize. Collectively these studies point to auxin as a cornerstone for maize biology that could be leveraged for improved crop resilience and yield."
Authors: Fan Feng, Xiaoli Guo, Xiuli Zhu, Yibo Hu, Yake Chen, Hongzheng Sun, Junzhou Li, Chenyun Zhao, Huwei Sun and Quanzhi Zhao.
Environmental and Experimental Botany (2023)
Highlights • D53-SPL14/17-PIN2 module links strigolactones and auxin in the regulation of tiller bud outgrowth responding to phosphate deficiency. • A novel mechanism for SL signaling-mediated modulation of rice tiller formation under LP condition.
Abstract: "Phosphorus (P) is an essential nutrient for food crops. P-deficiency inhibits tiller development of rice; thus, an understanding of the P-modulated tiller development mechanism is crucial for grain yield. Auxin and strigolactones (SLs) have been implicated as regulators of tiller formation in rice. However, the relationships between the two in P-modulated tiller development are unclear. Here we found that low-P (LP) inhibited rice tiller formation and tiller bud elongation, with higher levels of SLs. The strong interaction between D53 (SL signaling repressor) and SPL14 and 17 (SPL14/17) inhibited their transcriptional activities under normal P (NP) condition, and mutation of SPL14/17 eliminated their inhibitory effects on tiller formation under LP condition, showing SPL14/17 act downstream of SL signaling to inhibit tiller formation under P-deficiency in rice. Meanwhile, the expression levels of PIN2 were down-regulated under conditions of either LP and NP treated with GR24 when compared with NP condition, demonstrating SLs negative regulation of PIN2 transcription under LP condition. Further study showed that SPL14/17 inhibited the transcription expression of PIN2, and the knockout of PIN2 reduced tiller development by LP condition. Therefore, we presented that, under NP condition, binding of D53 to SPL14/17 represses their transcriptional inhibition, reversing SPL14/17-inhibited PIN2 transcription and promoting tiller development. Proteasomal degradation of D53 releases SPL14/17, thus repressing PIN2 transcription and preventing production of tillering under LP condition."
Authors: Manish Tiwari, Ritesh Kumar, Senthil Subramanian, Colleen J. Doherty and S.V. Krishna Jagadish.
Trends in Plant Science (2023)
Highlights: A healthy overall plant stature indispensably requires a firm base, and the root system must therefore be tolerant to low-temperature stress. The root system architecture is modulated by low-temperature stress, thereby affecting water and nutrient absorption. Phytohormone auxin and cytokinin signaling directly or indirectly regulate gravitropic response and root development during low-temperature stress. In addition, protective mechanisms during low-temperature stress-induced DNA damage in root stem cells involves auxin and cytokinin crosstalk. An interplay between auxin and cytokinin signaling in root tissue during low-temperature stress involving the activation or suppression of each other's signaling and transport cues, such as PIN proteins and the two-component system, determines the fate of root architecture and function.
Abstract: "Low-temperature stress alters root system architecture. In particular, changes in the levels and response to auxin and cytokinin determine the fate of root architecture and function under stress because of their vital roles in regulating root cell division, differentiation, and elongation. An intricate nexus of genes encoding components of auxin and cytokinin biosynthesis, signaling, and transport components operate to counteract stress and facilitate optimum development. We review the role of auxin transport and signaling and its regulation by cytokinin during root development and stem cell maintenance under low-temperature stress. We highlight intricate mechanisms operating in root stem cells to minimize DNA damage by altering phytohormone levels, and discuss a working model for cytokinin in low-temperatures stress response."
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