Genetic Engineering Publications - GEG Tech top picks
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Harnessing eukaryotic retroelement proteins for transgene insertion into human safe-harbor loci | Nature Biotechnology

Harnessing eukaryotic retroelement proteins for transgene insertion into human safe-harbor loci | Nature Biotechnology | Genetic Engineering Publications - GEG Tech top picks | Scoop.it
Current approaches for inserting autonomous transgenes into the genome, such as CRISPR–Cas9 or virus-based strategies, have limitations including low efficiency and high risk of untargeted genome mutagenesis. Here, we describe precise RNA-mediated insertion of transgenes (PRINT), an approach for site-specifically primed reverse transcription that directs transgene synthesis directly into the genome at a multicopy safe-harbor locus. PRINT uses delivery of two in vitro transcribed RNAs: messenger RNA encoding avian R2 retroelement-protein and template RNA encoding a transgene of length validated up to 4 kb. The R2 protein coordinately recognizes the target site, nicks one strand at a precise location and primes complementary DNA synthesis for stable transgene insertion. With a cultured human primary cell line, over 50% of cells can gain several 2 kb transgenes, of which more than 50% are full-length. PRINT advantages include no extragenomic DNA, limiting risk of deleterious mutagenesis and innate immune responses, and the relatively low cost, rapid production and scalability of RNA-only delivery. Transgenes are inserted into human cells by 2-RNA delivery of a retroelement protein and template.
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The recent approval of a CRISPR-Cas9 therapy for sickle-cell anemia demonstrates that gene-editing tools can do an excellent job of eliminating genes to cure inherited diseases. But it is still not possible to insert entire genes into the human genome to replace them with defective or deleterious genes. A new technique, called RNA-mediated Precise Transgene Insertion, or PRINT, exploits the ability of certain retrotransposons to efficiently insert whole genes into the genome without affecting other genome functions. PRINT would complement the recognized ability of CRISPR-Cas technology to deactivate genes, perform point mutations and insert short segments of DNA. For PRINT, one piece of delivered RNA encodes a common retroelement protein called the R2 protein, which has several active parts, including a nickase and a reverse transcriptase. The other RNA is the template for the transgenic DNA to be inserted, as well as the elements controlling gene expression

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The Sleeping Beauty Transposon Vector System for Treatment of Rare Genetic Diseases: an Unrealized Hope?

The Sleeping Beauty Transposon Vector System for Treatment of Rare Genetic Diseases: an Unrealized Hope? | Genetic Engineering Publications - GEG Tech top picks | Scoop.it
Curr Gene Ther. 2015 Jan 26. [Epub ahead of print]
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This review provides a state-of-the-art overview of preclinical studies for treatment of rare genetic diseases based on the SB transposase system for stable correction of the genetic defect. Diseases affecting the blood system, the connective tissue, the immune system, the metabolism, and the nervous system and their treatment utilizing the SB transposase system are discussed.


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CRISPR therapies march into clinic, but genotoxicity concerns linger - Nature

CRISPR therapies march into clinic, but genotoxicity concerns linger - Nature | Genetic Engineering Publications - GEG Tech top picks | Scoop.it
Following reports of collateral damage caused by CRISPR genome editing, now chromothripsis, a phenomenon associated with cancer, enters the spotlight.
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CRISPR therapies are increasingly being developed. However, a recent study has identified a new danger associated with CRISPR-Cas9-based therapies. The double-stranded DNA breaks introduced during CRISPR editing could lead to chromothripsis, an extremely damaging form of genomic rearrangement that results in the breakup of individual chromosomes and the subsequent reassembly of the pieces in a disordered order. Although most cells do not remain viable after undergoing such radical modification, those that do can, in theory, express oncogenic fusion proteins or result in the deregulated expression of particular genes that can cause problems. Other studies have reported CRISPR-Cas9-induced DNA deletions and large-scale chromosomal rearrangements, CRISPR-Cas9 activation of the tumour suppressor protein p53, which could select for inactivating and cancer-causing mutations, and the induction of large chromosomal truncations. In addition, the presence of pre-existing antibodies and T cells directed against Cas9 enzymes in large percentages of the population could compromise efficacy. However, base and primer editing methods, which use single strand nicks rather than double strand breaks to introduce a modification, are much less likely to cause chromothripsis.

woodfieldplumbingandheating's comment, October 18, 2021 2:16 AM
good